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consensus-genome

Here are 2 public repositories matching this topic...

cinnetcrash / COVID19_Inhouse_Script

This repo contains in-house scripts for Illumina and Nanopore reads

nanopore illumina bioinformatics-scripts kraken2 sars-cov-2 consensus-genome

Updated Aug 3, 2026
Shell

aduton1000 / hpv-nanopore-pipeline

CPU-only Oxford Nanopore pipeline for HPV whole-genome reconstruction (ARTIC + Clair3); validated end-to-end, all-users cluster deployment.

nanopore bioinformatics-pipeline oxford-nanopore hpv amplicon-sequencing artic cervical-cancer human-papillomavirus clair3 consensus-genome

Updated Nov 6, 2026
Python

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