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Add en face slab viewing - #978

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PaulHax:oct-en-face
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PaulHax:oct-en-face

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@PaulHax

@PaulHax PaulHax commented Oct 19, 2026 •

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Add an En face view for grayscale 3D volumes, including native retinal OCT. Mean, maximum, and sum projections use an adjustable slab along any source-grid axis, with independent contrast, pan, zoom, crosshairs, and reference lines. Changing the projection refits automatic contrast, and the view configuration is saved with the session.

Support native OCT spatial metadata and retain valid DICOM pixel spacing and multiframe spacing. The shared slab representation uses vtk.js reslice rendering with corrections for slab sampling and nonzero image extents. See the view implementation and mapper patch.

Includes the retinal sample with companion labels loaded by segmentation filename matching.

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@PaulHax
PaulHax marked this pull request as draft October 19, 2026 18:53
@PaulHax PaulHax changed the title Add retinal OCT en face viewing and thickness highlighting Add Enface slab viewing and occupied-depth highlighting Oct 27, 2026
Comment thread docs/configuration_file.md Resolved
Comment thread docs/configuration_file.md Resolved
@PaulHax
PaulHax force-pushed the oct-en-face branch 2 times, most recently from 6362f0f to 59b60f2 Compare October 29, 2026 00:34
@PaulHax PaulHax changed the title Add Enface slab viewing and occupied-depth highlighting Add Enface slab viewing Oct 29, 2026
@PaulHax
PaulHax changed the base branch from main to segmentation-filename-matching October 29, 2026 00:35
@PaulHax
PaulHax force-pushed the segmentation-filename-matching branch from 89ea736 to 492e025 Compare October 29, 2026 00:53
@PaulHax PaulHax changed the title Add Enface slab viewing Add en face slab viewing Oct 29, 2026
@PaulHax
PaulHax changed the base branch from segmentation-filename-matching to main October 29, 2026 02:29
@PaulHax
PaulHax marked this pull request as ready for review October 29, 2026 14:04
@PaulHax
PaulHax force-pushed the oct-en-face branch 5 times, most recently from db74f7f to 990a169 Compare November 1, 2026 16:21

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