Simulator of viral infection spread and containment in cell monolayer.
IFNepitope: Designing of Interferon-Gamma Inducing MHC Class-II Binders
scRNA-seq of ADAR1-KO melanoma TME — pDC/monocyte ISG programs, PAGA pseudotime, TCGA SKCM survival validation | Scanpy · Python
End-to-end host–virus RNA-seq analysis of Influenza A infection.
Cross-study RNA-seq meta-analysis of microglial transcriptomic signatures in response to gut microbiome depletion and microbial metabolite treatment.
Analysis code and reference outputs for a multi-cohort study of T2, interferon, and repair-ECM programs in childhood asthma.
Knowledge or sparsity? A controlled test of gene set masks in an interpretable single-cell VAE.
Resources supporting comparative and phylogenetic analysis of IFNL genes
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