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Migrate tests/test_mpdist.py to npt.assert_allclose #1204

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Merged
seanlaw merged 1 commit into from
Aug 26, 2026
Merged

Migrate tests/test_mpdist.py to npt.assert_allclose #1204

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40 changes: 20 additions & 20 deletions tests/test_mpdist.py
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Original file line number Diff line number Diff line change
Expand Up @@ -50,11 +50,11 @@ def test_mpdist_vect(T_A, T_B):
T_subseq_isconstant = naive.rolling_isconstant(T_B, m)
μ_Q, σ_Q = naive.compute_mean_std(T_A, m)
M_T, Σ_T = naive.compute_mean_std(T_B, m)
comp_mpdist_vect = _mpdist_vect(
cmp_mpdist_vect = _mpdist_vect(
T_A, T_B, m, μ_Q, σ_Q, M_T, Σ_T, Q_subseq_isconstant, T_subseq_isconstant
)

npt.assert_almost_equal(ref_mpdist_vect, comp_mpdist_vect)
npt.assert_allclose(cmp_mpdist_vect, ref_mpdist_vect, atol=1.5e-07)


@pytest.mark.parametrize("T_A, T_B", test_data)
Expand All @@ -67,7 +67,7 @@ def test_mpdist_vect_percentage(T_A, T_B, percentage):
T_subseq_isconstant = naive.rolling_isconstant(T_B, m)
μ_Q, σ_Q = naive.compute_mean_std(T_A, m)
M_T, Σ_T = naive.compute_mean_std(T_B, m)
comp_mpdist_vect = _mpdist_vect(
cmp_mpdist_vect = _mpdist_vect(
T_A,
T_B,
m,
Expand All @@ -80,7 +80,7 @@ def test_mpdist_vect_percentage(T_A, T_B, percentage):
percentage=percentage,
)

npt.assert_almost_equal(ref_mpdist_vect, comp_mpdist_vect)
npt.assert_allclose(cmp_mpdist_vect, ref_mpdist_vect, atol=1.5e-07)


@pytest.mark.parametrize("T_A, T_B", test_data)
Expand All @@ -93,20 +93,20 @@ def test_mpdist_vect_k(T_A, T_B, k):
T_subseq_isconstant = naive.rolling_isconstant(T_B, m)
μ_Q, σ_Q = naive.compute_mean_std(T_A, m)
M_T, Σ_T = naive.compute_mean_std(T_B, m)
comp_mpdist_vect = _mpdist_vect(
cmp_mpdist_vect = _mpdist_vect(
T_A, T_B, m, μ_Q, σ_Q, M_T, Σ_T, Q_subseq_isconstant, T_subseq_isconstant, k=k
)

npt.assert_almost_equal(ref_mpdist_vect, comp_mpdist_vect)
npt.assert_allclose(cmp_mpdist_vect, ref_mpdist_vect, atol=1.5e-07)


@pytest.mark.parametrize("T_A, T_B", test_data)
def test_mpdist(T_A, T_B):
m = 3
ref_mpdist = naive.mpdist(T_A, T_B, m)
comp_mpdist = mpdist(T_A, T_B, m)
cmp_mpdist = mpdist(T_A, T_B, m)

npt.assert_almost_equal(ref_mpdist, comp_mpdist)
npt.assert_allclose(cmp_mpdist, ref_mpdist, atol=1.5e-07)


@pytest.mark.parametrize("T_A, T_B", test_data)
Expand All @@ -125,35 +125,35 @@ def test_mpdist_with_isconstant(T_A, T_B):
T_A_subseq_isconstant=T_A_subseq_isconstant,
T_B_subseq_isconstant=T_B_subseq_isconstant,
)
comp_mpdist = mpdist(
cmp_mpdist = mpdist(
T_A,
T_B,
m,
T_A_subseq_isconstant=T_A_subseq_isconstant,
T_B_subseq_isconstant=T_B_subseq_isconstant,
)

npt.assert_almost_equal(ref_mpdist, comp_mpdist)
npt.assert_allclose(cmp_mpdist, ref_mpdist, atol=1.5e-07)


@pytest.mark.parametrize("T_A, T_B", test_data)
@pytest.mark.parametrize("percentage", percentage)
def test_mpdist_percentage(T_A, T_B, percentage):
m = 3
ref_mpdist = naive.mpdist(T_A, T_B, m, percentage=percentage)
comp_mpdist = mpdist(T_A, T_B, m, percentage=percentage)
cmp_mpdist = mpdist(T_A, T_B, m, percentage=percentage)

npt.assert_almost_equal(ref_mpdist, comp_mpdist)
npt.assert_allclose(cmp_mpdist, ref_mpdist, atol=1.5e-07)


@pytest.mark.parametrize("T_A, T_B", test_data)
@pytest.mark.parametrize("k", k)
def test_mpdist_k(T_A, T_B, k):
m = 3
ref_mpdist = naive.mpdist(T_A, T_B, m, k=k)
comp_mpdist = mpdist(T_A, T_B, m, k=k)
cmp_mpdist = mpdist(T_A, T_B, m, k=k)

npt.assert_almost_equal(ref_mpdist, comp_mpdist)
npt.assert_allclose(cmp_mpdist, ref_mpdist, atol=1.5e-07)


@pytest.mark.filterwarnings("ignore:numpy.dtype size changed")
Expand All @@ -165,9 +165,9 @@ def test_mpdisted(T_A, T_B, dask_cluster):
with Client(dask_cluster) as dask_client:
m = 3
ref_mpdist = naive.mpdist(T_A, T_B, m)
comp_mpdist = mpdisted(dask_client, T_A, T_B, m)
cmp_mpdist = mpdisted(dask_client, T_A, T_B, m)

npt.assert_almost_equal(ref_mpdist, comp_mpdist)
npt.assert_allclose(cmp_mpdist, ref_mpdist, atol=1.5e-07)


@pytest.mark.filterwarnings("ignore:numpy.dtype size changed")
Expand All @@ -191,7 +191,7 @@ def test_mpdisted_with_isconstant(T_A, T_B, dask_cluster):
T_A_subseq_isconstant=T_A_subseq_isconstant,
T_B_subseq_isconstant=T_B_subseq_isconstant,
)
comp_mpdist = mpdisted(
cmp_mpdist = mpdisted(
dask_client,
T_A,
T_B,
Expand All @@ -200,7 +200,7 @@ def test_mpdisted_with_isconstant(T_A, T_B, dask_cluster):
T_B_subseq_isconstant=T_B_subseq_isconstant,
)

npt.assert_almost_equal(ref_mpdist, comp_mpdist)
npt.assert_allclose(cmp_mpdist, ref_mpdist, atol=1.5e-07)


@pytest.mark.parametrize("T_A, T_B", test_data)
Expand All @@ -225,8 +225,8 @@ def test_mpdist_vect_with_isconstant(T_A, T_B):
T_subseq_isconstant = T_B_subseq_isconstant
μ_Q, σ_Q = naive.compute_mean_std(T_A, m)
M_T, Σ_T = naive.compute_mean_std(T_B, m)
comp_mpdist_vect = _mpdist_vect(
cmp_mpdist_vect = _mpdist_vect(
T_A, T_B, m, μ_Q, σ_Q, M_T, Σ_T, Q_subseq_isconstant, T_subseq_isconstant
)

npt.assert_almost_equal(ref_mpdist_vect, comp_mpdist_vect)
npt.assert_allclose(cmp_mpdist_vect, ref_mpdist_vect, atol=1.5e-07)
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