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scverse
spatialdata-plot-tutorials
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Add Visium breast-cancer tutorial
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May 11, 2026
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Add Visium breast-cancer tutorial
#2
timtreis
merged 8 commits into
main
scverse/spatialdata-plot-tutorials:main
from
feat/visium-tutorial
scverse/spatialdata-plot-tutorials:feat/visium-tutorial
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Add Visium breast-cancer tutorial
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Wire pre-commit.ci, fix lint/execute drift, use canonical preview URL
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Drop execute.yaml's byte-diff check; rely on cell errors
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Use squidpy.datasets, drop em-dashes, add watermark cells
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Suppress E402 in watermark cells (imports follow other cells)
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Bump pre-commit hooks (nbqa 1.9.0 -> 1.9.1, ruff -> 0.15.12, hooks -> 6.0)
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Simplify workflows and clean up after diff-check removal
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Move Visium notebook to examples/
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