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tRFtarget-pipeline
tRFtarget-pipeline PublictRFtarget-pipeline is designed to find RNA-RNA interaction sites between transfer RNA-derived fragments (tRFs) and target RNAs, and is used in tRFtarget database (http://trftarget.net/).
Repositories
- tRFtarget Public
tRFtarget (http://trftarget.net/) is a comprehensive platform consolidating both computationally predicted and experimentally validated binding interactions between transfer RNA-derived fragments (tRFs) and target transcripts across multiple organisms.
- tRFtarget-pipeline Public
tRFtarget-pipeline is designed to find RNA-RNA interaction sites between transfer RNA-derived fragments (tRFs) and target RNAs, and is used in tRFtarget database (http://trftarget.net/).
- PDS-Lap_simulations Public
PDS-Lap_simulations contains all files to replicate the simulation study in the PDS-Lap paper.
- PDS-Lap Public
PDS-Lap is a machine learning methods which combines post-double-selection for baseline variable selection with Laplacian regularization. This approach is designed for the estimation and inference of drug effect comparions, incorporating external drug knowledge by integrating drug similarity information.
- RVMMAT Public
R package that performs retrospective varying coefficients mixed model association test for longitudinal binary traits in population samples.
- DML-RC Public
DML-RC is a double/debiased machine learning approach with regression calibration to correct for bias due to measurement error. This approach is designed for evaluating the causal effects of correlated multi-pollutant PM2.5 constituents measured with correlated error.
- DML-RC_simulations Public
DML-RC_simulations contains all files to replicate the simulation study in the DML-RC paper.
- SDePER_Analysis Public Forked from az7jh2/SDePER_Analysis
This Github repository holds Notebooks and results of running SDePER on both Simulated and Real datasets, and Notebooks for Figure Panels in manuscript.
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