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Prepare release 0.4.0 #454
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9fa1bd7
Prepare release 0.3.2
alejoe91 c659412
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] 8bc66ad
Add PR to release notes
alejoe91 23f883b
Merge branch 'main' of github.com:SpikeInterface/probeinterface into …
alejoe91 ad8dd52
add #414 PR
alejoe91 f1c9c13
Add #410
alejoe91 d37ffe1
add missing PRs
alejoe91 bfcb5c0
Merge branch 'main' into prepare_release
alejoe91 e7dcf76
Merge branch 'main' of github.com:SpikeInterface/probeinterface into …
alejoe91 4235ef0
wip
alejoe91 0d4e20e
add last PR
alejoe91 51c6086
Merge branch 'prepare_release' of github.com:alejoe91/probeinterface …
alejoe91 b6a48d3
docs: release notes
alejoe91 69e8f64
Merge branch 'main' of github.com:SpikeInterface/probeinterface into …
alejoe91 5f36e0f
doc: update release notes
alejoe91 f824874
[pre-commit.ci] auto fixes from pre-commit.com hooks
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,38 @@ | ||
| #!/bin/bash | ||
| if [ $# -eq 0 ]; then | ||
| echo "Usage: $0 START_DATE (format: YEAR-MM-DD) END_DATE [LABEL] [BRANCH1,BRANCH2] [LIMIT]" | ||
| exit 1 | ||
| fi | ||
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| START_DATE="$1" | ||
| END_DATE="$2" | ||
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| if [ -n "$4" ]; then | ||
| IFS=',' read -ra BRANCHES <<< "$4" | ||
| else | ||
| BRANCHES=("main") | ||
| fi | ||
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| if [ -n "$5" ]; then | ||
| LIMIT=$5 | ||
| else | ||
| LIMIT=300 | ||
| fi | ||
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| OUTPUT="" | ||
| for BRANCH in "${BRANCHES[@]}"; do | ||
| OUTPUT+=$(gh pr list --repo SpikeInterface/probeinterface --limit $LIMIT --base "$BRANCH" --state merged --json number,title,mergedAt \ | ||
| | jq -r --arg start_date "${START_DATE}T00:00:00Z" --arg end_date "${END_DATE}T00:00:00Z" \ | ||
| '.[] | select(.mergedAt >= $start_date and .mergedAt <= $end_date) | "* \(.title) (#\(.number))"') | ||
| done | ||
| if [ -n "$OUTPUT" ]; then | ||
| echo "" | ||
| echo "$OUTPUT" | ||
| echo "" | ||
| fi | ||
|
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| echo "Contributors:" | ||
| echo "" | ||
| gh pr list --repo SpikeInterface/probeinterface --limit 1000 --base main --state merged --json number,title,author,mergedAt \ | ||
| | jq -r --arg start_date "${START_DATE}T00:00:00Z" --arg end_date "${END_DATE}T00:00:00Z" \ | ||
| '[.[] | select(.mergedAt >= $start_date and .mergedAt <= $end_date and .author.login != "app/pre-commit-ci") | .author.login] | unique | .[] | "* @" + .' |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,69 @@ | ||
| probeinterface 0.4.0 | ||
| -------------------- | ||
|
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| Sept, 15th 2026 | ||
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| Features | ||
| ^^^^^^^^ | ||
|
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| * Add shank thickness to the Neuropixels probe annotations (#467) | ||
| * Update schema with probe_ids and global_contact_order (#464) | ||
| * Document contact_id uniqueness and enforce it on (probe_index, contact_id) (#463) | ||
| * Add support for BioCAM files recorded with BrainWave 6 (#458) | ||
| * Add regex validation pattern in schema version propert (#450) | ||
| * Enhance `ProbeGroup` API and add `ProbeGroup._global_contact_order` for interleaved contacts (#446) | ||
| * Add Neuropixels 2.0 support to `read_spikegadgets_neuropixels` (#441) | ||
| * Add Neuropixels saturation levels estimation from probe table/metadata (#434) | ||
| * Auto-generate `contact_ids` when not explicitly set (#429) | ||
| * Migrate `read_spikegadgets` to the catalogue pattern (#418) | ||
| * Make `_parse_imro_string` self-contained by deriving IMRO field schemas from the catalogue (#417) | ||
| * Implement copy/get_slice/get_global_contact_positions for probegroup (#416) | ||
| * Remove legacy probe construction path for `read_imro` and support NP1110 (#410) | ||
|
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| Bug fixes | ||
| ^^^^^^^^^ | ||
|
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| * Let plot_probe accept xlims, ylims and zlims independently (#462) | ||
| * Accept plane names for the axis argument of Probe.rotate (#461) | ||
| * Fix backward compatibility of to/from numpy #455 | ||
| * Preserve planar contour on ProbeGroup slicing and clarify ambiguous `select_contacts` errors (#453) | ||
| * Discard 'apps' folder when listing manufacturers (#451) | ||
| * Raise on wrong-sized `device_channel_indices` instead of silently accepting (#430) | ||
| * Preserve identity on `Probe.copy()` (#428) | ||
| * Add contact_sides to JSON schema (#419) | ||
| * Fix quad-base with custom names (#413) | ||
|
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| Deprecations | ||
| ^^^^^^^^^^^^ | ||
|
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| * Rename `read_spikegadgets` to `read_spikegadgets_neuropixels` and add `has_spikegadgets_neuropixels_probes` (#440) | ||
| * Rename `read_openephys` to `read_openephys_neuropixels` and add `has_neuropixels_probes` (#427) | ||
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| Testing / CI | ||
| ^^^^^^^^^^^^ | ||
|
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| * Fix postprocess probe features (#456) | ||
| * Update CI actions (#438) | ||
| * Add NP2020 probe to test suite (#435) | ||
|
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| Docs | ||
| ^^^^ | ||
|
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| * Document the Neuropixels catalogue pattern (#443) | ||
|
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| Packaging | ||
| ^^^^^^^^^ | ||
|
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| * Fix typing, deprecations, and update to Python3.10 (#414) | ||
|
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| Contributors: | ||
|
|
||
| * @adityasingh2400 | ||
| * @alejoe91 | ||
| * @b-grimaud | ||
| * @chrishalcrow | ||
| * @h-mayorquin | ||
| * @samuelgarcia | ||
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