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Pull requests: ScrollPrize/villa

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Pull requests list

ink_detection: robust flat normalization must exclude the reader's zero padding
#1773 opened Sep 13, 2026 by rodriguescarson Loading…
1
ink_detection: native full-3D inference must honour the checkpoint's input_pad_depth_to
#1772 opened Sep 13, 2026 by rodriguescarson Loading…
1
loss: standalone MemoryEfficientSoftDiceLoss must consume probabilities, not raw logits
#1771 opened Sep 13, 2026 by rodriguescarson Loading…
1
ink-detection: add Apple Silicon MPS inference support
#1770 opened Sep 12, 2026 by SurgeFok Loading…
1
VC3D open data: do not seed a placeholder bbox from a stored bbox carrying the -1 marker (refs #1734, #1618)
#1769 opened Sep 12, 2026 by kadenpool Contributor • Draft
1
running inputs for spiral workspace / annotation methods
#1768 opened Sep 12, 2026 by bruniss Member Loading…
15
ink_detection: fall back to a CPU edt dilation when cuCIM is unavailable
#1767 opened Sep 12, 2026 by mythorath Loading…
1 task done
5
optimized_inference README: centre the 62-layer window for the 2 um 3D-decoder model
#1766 opened Sep 11, 2026 by kadenpool Contributor • Draft
1
volume-cartographer README: working on remote volumes from the command line
#1763 opened Sep 10, 2026 by Bullo27 Contributor Loading…
1 task done
1
feat(render): export bounded final sampling rays for depth diagnostics
#1761 opened Sep 10, 2026 by aviad12g Contributor • Draft
2 tasks
1
fix(lasagna): use cosine channel spacing for dense loss sampling
#1754 opened Sep 10, 2026 by aviad12g Contributor • Draft
1 task
1
Fix lasagna flush worker error
#1752 opened Sep 10, 2026 by spelufo Contributor Loading…
1
vesuvius: say which extra to install instead of failing as None
#1747 opened Sep 9, 2026 by mithilp Loading…
1 task
2
M7 per scroll presets
#1745 opened Sep 9, 2026 by gmDevi Loading…
1 task done
1
spiral-fitting: README recipe for tracks-only scrolls, umbilicus and winding-count estimators
#1736 opened Sep 8, 2026 by gmDevi Loading…
1 task done
2
spiral-fitting: ignore a truncated track crossing cache instead of crashing
#1735 opened Sep 8, 2026 by gmDevi • Draft
1 task done
1
spiral-fitting: fit with tracks when the dataset has no outer shell
#1732 opened Sep 8, 2026 by gmDevi Loading…
1 task done
2
render_ink: warn when a rendered strip is entirely black
#1728 opened Sep 7, 2026 by jonmarrs Contributor Loading…
1
vesuvius: normalize 2D and 1D reads over the whole slice
#1726 opened Sep 7, 2026 by mithilp Loading…
1 task done
6
vesuvius: make the documented segment call work without scroll_id
#1725 opened Sep 7, 2026 by mithilp Loading…
1 task done
13
tifxyz_label_transfer: close memory maps so temp dirs can be removed on Windows
#1724 opened Sep 7, 2026 by hunghy93-pixel Loading…
1 task done
1
1
spiral-fitting: note which resident-pool sidecars the defaults load
#1723 opened Sep 7, 2026 by jonmarrs Contributor Loading…
1
spiral-fitting: document the two metrics get_ink_metrics.py already writes
#1722 opened Sep 7, 2026 by jonmarrs Contributor Loading…
1
docs(spiral tutorial): note that input_use_tracks defaults to false
#1719 opened Sep 7, 2026 by ttendoscopie-creator Loading…
1 task done
1
docs: add eligible-spiral-dataset to community projects
#1718 opened Sep 7, 2026 by ttendoscopie-creator Loading…
1 task done
1
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