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1. PHATE PHATE Public

   PHATE (Potential of Heat-diffusion for Affinity-based Transition Embedding) is a tool for visualizing high dimensional data.

   Python 557 82

2. MAGIC MAGIC Public

   MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological datasets.

   Jupyter Notebook 385 107

3. SAUCIE SAUCIE Public

   Python 101 28

4. MELD MELD Public

   Quantifying experimental perturbations at single cell resolution

   Python 115 10

5. Multiscale_PHATE Multiscale_PHATE Public

   Creating multi-resolution embeddings and clusters from high dimensional data

   Jupyter Notebook 58 11

6. MIOFlow MIOFlow Public

   Jupyter Notebook 42 8