Add 'extend' functionality - #6

Open

gavinband wants to merge 7 commits into

JasonAHendry:masterfrom

gavinband:extend-functionality

Commits on Mar 8, 2026

annotator.py: move **qseqid_df[self.annotations].sum().to_dict() -> **qseqid_df[self.annotations.keys()].sum().to_dict() to fix indexing issue
gavinband
committed
47c3350
Multiply: support an [Extend] section that specifies a previously designed set of primers that this run will extend.
gavinband
committed
ea5e31b
Updated pipeline image for new [Extend] functionality
gavinband
committed
1de3324
Added a design with [Extend] section
gavinband
committed
3087da1
parsing.py: in [Extend], allow to specify IDs and names, or only IDs, and validate them against the given design file.
gavinband
committed
b1ba7f0
README: Added a section about the [Extend] section
gavinband
committed
8ac683d
README: improvement
gavinband
committed
d10816a