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Feature/reena-steven-integrated-endpoint
- #328
#328
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Feature/reena-steven-integrated-endpoint
#328
rmobmina
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BioAnalyticResource:dev
BioAnalyticResource/BAR_API:dev
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rmobmina:feature/reena-steven-integrated-endpoint
rmobmina/BAR_API:feature/reena-steven-integrated-endpoint
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Commits on Jun 25, 2026
Add eFP/ePlant gene ID validation, microarray probeset support, and master DB list
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Commits on Jul 17, 2026
Integrate Vincent's regex registry, fix master JSON species, refactor endpoints to use it
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Remove scratch CSVs, MDs, and one-off analysis files from repo root
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Commits on Jul 23, 2026
Remove personal attribution headers from source and test files
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Make combined_master.json build deterministic
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Fix failing tests: generalize mfinder skip, drop orphaned eplant test
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Remove dead-on-arrival DB imports from config/init.sh
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Add eFP "To the Experiment" link audit script
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Merge remote-tracking branch 'upstream/dev' into cleaned-endpoint
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Unify per-species gene ID validation onto Vincent's regex registry
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Fix CI: real fixture data never loading, rpds-py incompatible with 3.10
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Remove api/random_rows_json/ from version control
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Commits on Jul 27, 2026
Add SUPeR Viewer UMAP + pseudobulk gene expression endpoints
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Add data-retrieval coverage for the UMAP and pseudobulk expression endpoints
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Remove build/scrape/reporting tooling not needed by the running API
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Populate real sample-group data for the 7 SUPeR Viewer pseudobulk databases
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Commits on Jul 28, 2026
Clean up PR: drop local ePlant XML data, fold master_data_utils into bar_utils, and scope build-script exclusions to .git/info/exclude
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Commits on Jul 30, 2026
Add api/random_rows_json/ fallback dataset for local eFP seed queries
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