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# Development and CI verbs live here; Hatch owns Python environments in pyproject.toml.
# Install: uv tool install hatch==1.16.5 && uv tool install rust-just==1.58.0
# Select test dependencies/interpreter: HATCH_ENV=test.py3.13-minimal just test
# On Windows, use Git Bash (the same shell used by the test workflow).
set shell := ["bash", "-eu", "-o", "pipefail", "-c"]
set windows-shell := ["bash", "-eu", "-o", "pipefail", "-c"]
set positional-arguments
hatch_env := env("HATCH_ENV", "test.py3.12-optional")
# Deliberately a different variable from HATCH_ENV: `just gpu` must not inherit a
# CPU test environment that happens to be exported in the caller's shell, which
# would run `pytest -m gpu` against an environment built without the gpu feature.
gpu_env := env("GPU_HATCH_ENV", "gputest.py3.12")
# Pinned so a prek release cannot change what CI lints without a commit here.
prek_version := "0.5.3"
# Documentation and changelog tooling resolves from uv.lock, not a hatch environment.
# There is only ever one docs toolchain, so it can be locked and hash-verified, and
# dependabot's uv ecosystem keeps it current. Hatch still owns the test environments,
# which exist per interpreter and per dependency set and cannot live in one lockfile.
docs_run := "uv run --frozen --group docs"
# The hatch docs environment used to set these; they belong with the mkdocs calls now.
mkdocs_env := "DISABLE_MKDOCS_2_WARNING=true NO_MKDOCS_2_WARNING=true"
# List available recipes
default:
@just --list
# List available Python environments
envs:
hatch env show
# Create the selected Python environment and list its installed packages
setup: && list-env
hatch env create {{ quote(hatch_env) }}
# List packages in the selected Python environment
list-env:
hatch run {{ quote(hatch_env) }}:pip list
# Run unit tests; pass pytest arguments, e.g. just test -k 'array and resize'
test *args:
hatch run {{ quote(hatch_env) }}:pytest --ignore tests/benchmarks "$@"
# Run unit tests and write coverage.xml and junit.xml
coverage *args:
hatch run {{ quote(hatch_env) }}:coverage run --source=src -m pytest --ignore tests/benchmarks --junitxml=junit.xml -o junit_family=legacy "$@"
hatch run {{ quote(hatch_env) }}:coverage xml
# Run unit tests and generate an HTML coverage report
coverage-html *args:
hatch run {{ quote(hatch_env) }}:coverage run --source=src -m pytest --ignore tests/benchmarks "$@"
hatch run {{ quote(hatch_env) }}:coverage html
# Serve the HTML coverage report (default port 8000)
coverage-serve *args:
hatch run {{ quote(hatch_env) }}:python -m http.server -d htmlcov "$@"
# Run slow Hypothesis tests and write coverage.xml
hypothesis *args:
hatch run {{ quote(hatch_env) }}:coverage run --source=src -m pytest -nauto --run-slow-hypothesis tests/test_properties.py tests/test_store/test_stateful* "$@"
hatch run {{ quote(hatch_env) }}:coverage xml
# Validate executable documentation code blocks
doctest *args:
hatch run doctest:pytest tests/test_docs.py -v "$@"
# Run the benchmark suite
benchmark *args:
hatch run {{ quote(hatch_env) }}:pytest --benchmark-enable tests/benchmarks "$@"
# Run benchmarks under CodSpeed
benchmark-codspeed *args:
hatch run {{ quote(hatch_env) }}:pytest tests/benchmarks --codspeed "$@"
# Run GPU tests with coverage; select the environment with GPU_HATCH_ENV
gpu *args:
HATCH_ENV={{ quote(gpu_env) }} just coverage -m gpu "$@"
# Build documentation (warnings are errors)
docs-build *args:
{{ mkdocs_env }} {{ docs_run }} mkdocs build --strict "$@"
# Serve documentation with live reload
docs-serve *args:
{{ mkdocs_env }} {{ docs_run }} mkdocs serve --watch src "$@"
# Check that every public export has API documentation
check-doc-exports *args:
{{ docs_run }} python ci/check_documented_exports.py docs/api "$@"
# Check documentation source conventions
lint-docs *args:
{{ docs_run }} python ci/lint_docs.py "$@"
# Report unlinked types in built documentation
check-doc-links *args:
{{ docs_run }} python ci/check_unlinked_types.py "$@"
# Run source documentation checks followed by a strict build
docs-check: check-doc-exports lint-docs docs-build
# Run all pre-commit hooks (ruff, codespell, mypy, repo-review, ...)
lint *args:
uvx prek@{{ prek_version }} run --show-diff-on-failure --color=always --all-files "$@"
# Run hooks with a custom selection, e.g. just hooks run --last-commit
hooks +args:
uvx prek@{{ prek_version }} "$@"
# prek is installed as a persistent uv tool rather than run through uvx: the hook shim
# prek writes into .git/hooks hard-codes the binary path it was installed from and falls
# back to `prek` on PATH, and a uvx archive path stops existing at the next cache prune.
# Install local pre-commit hooks
hooks-install:
uv tool install prek=={{ prek_version }}
prek install
# Type-check the library using the locked tooling environment
typecheck *args:
uv run --frozen mypy "$@"
# Check that uv.lock is in sync with pyproject.toml
lock-check:
uv lock --check
# Update the dependency lockfile
lock *args:
uv lock "$@"
# Build the source distribution and wheel
build *args:
hatch build "$@"
# Create a changelog fragment (interactive without arguments)
changelog *args:
{{ docs_run }} towncrier create "$@"
# Preview the next release's changelog
changelog-draft *args:
{{ docs_run }} towncrier build --draft --version Unreleased "$@"
# Build release notes; pass --version and --yes when preparing a release
changelog-build *args:
{{ docs_run }} towncrier build "$@"
# Check changelog filenames (default: changes/; accepts a package changes directory)
check-changelogs *args:
uv run --no-project python ci/check_changelog_entries.py "$@"
# Check recipe formatting of the root Justfile and every package justfile
just-check:
just --fmt --check
shopt -s nullglob; for f in packages/*/justfile; do just --justfile "$f" --fmt --check; done
# Run a zarr-metadata recipe, or list its recipes with no arguments
zarr-metadata *args:
just --justfile packages/zarr-metadata/justfile "$@"
# Run a zarr-indexing recipe, or list its recipes with no arguments
zarr-indexing *args:
just --justfile packages/zarr-indexing/justfile "$@"
# Run a zarr-http-server recipe, or list its recipes with no arguments
zarr-http-server *args:
just --justfile packages/zarr-http-server/justfile "$@"