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Define runtime architecture and module boundaries #13

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@ian-pascoe

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Which deep module boundaries, interfaces, adapters, ownership rules, state stores, concurrency model, and library choices produce the agreed gateway behavior in the established TypeScript and Effect workspace, including one revisioned SQL state model with SQLite and PostgreSQL adapters, a separate Better Auth interface over the same database, Host Configuration Snapshot acceptance, one administration command interface, and source adapters that do not couple to MCP transports or operator interfaces?

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