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Add checkpoint and resume support for long simulations #203

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@VEZY

Long-running, growing, and multirate simulations need a supported way to stop and resume without changing results.

Define a checkpoint contract covering object status and topology, current step, clocks, temporal buffers, environment position, and retained-output state. Prefer rebuilding compiled caches deterministically on restore. Add split-run equivalence tests against an uninterrupted simulation.

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