diff --git a/.changeset/raw-svelte-options-store.md b/.changeset/raw-svelte-options-store.md
new file mode 100644
index 0000000000..58fe7a1ab9
--- /dev/null
+++ b/.changeset/raw-svelte-options-store.md
@@ -0,0 +1,5 @@
+---
+'@tanstack/svelte-table': patch
+---
+
+Fix controlled `expanded` and `pagination` state resetting straight after each change. The options store now uses `$state.raw`, so an options sync no longer wraps `data` in a new proxy, which the core row model treated as new data and answered by running its auto-resets.
diff --git a/packages/svelte-table/src/reactivity.svelte.ts b/packages/svelte-table/src/reactivity.svelte.ts
index a251a7452e..93697c5e49 100644
--- a/packages/svelte-table/src/reactivity.svelte.ts
+++ b/packages/svelte-table/src/reactivity.svelte.ts
@@ -31,8 +31,14 @@ function subscribeToRune<T>(
   return { unsubscribe }
 }
 
+/**
+ * Backs the options store. Uses `$state.raw` because `set` always replaces the
+ * whole options object: a deep `$state` would wrap `options.data` in a new proxy
+ * on every set, which the row model treats as new data and resets controlled
+ * pagination/expanded state (#6640).
+ */
 function createRuneWritableAtom<T>(initialValue: T): Atom<T> {
-  let value = $state(initialValue)
+  let value = $state.raw(initialValue)
 
   return {
     set: (updater: T | ((prevVal: T) => T)) => {
diff --git a/packages/svelte-table/tests/adapter-lifecycle.test.ts b/packages/svelte-table/tests/adapter-lifecycle.test.ts
index ac6d03bae5..dc30ee79ec 100644
--- a/packages/svelte-table/tests/adapter-lifecycle.test.ts
+++ b/packages/svelte-table/tests/adapter-lifecycle.test.ts
@@ -4,6 +4,7 @@ import { describe, expect, test, vi } from 'vitest'
 import { act, fireEvent, render, screen } from '@testing-library/svelte'
 import { createAtom } from '@tanstack/svelte-store'
 import CallbackHarness from './fixtures/CallbackHarness.svelte'
+import ExpandingHarness from './fixtures/ExpandingHarness.svelte'
 import PaginationHarness from './fixtures/PaginationHarness.svelte'
 import ReactivityHarness from './fixtures/ReactivityHarness.svelte'
 import RuneStateHarness from './fixtures/RuneStateHarness.svelte'
@@ -144,6 +145,26 @@ describe('Svelte adapter lifecycle and reactive options', () => {
     expect(outputText('Paginated row ids')).toBe('0,1,2')
   })
 
+  test('createTableState-controlled pagination is not reset by its own change', async () => {
+    render(PaginationHarness)
+
+    await fireEvent.click(screen.getByRole('button', { name: 'Next page' }))
+    await act()
+
+    expect(outputText('Paginated row ids')).toBe('5,6,7,8,9')
+  })
+
+  test('createTableState-controlled expanded state is not reset by its own change', async () => {
+    render(ExpandingHarness)
+
+    await fireEvent.click(
+      screen.getByRole('button', { name: 'Expand first row' }),
+    )
+    await act()
+
+    expect(outputText('Expanded row ids')).toBe('1')
+  })
+
   test('native rune projections only rerun for their tracked dependency', async () => {
     const selectedRowCaptor = vi.fn<(selected: boolean) => void>()
     const selectionCaptor = vi.fn<(selection: RowSelectionState) => void>()
diff --git a/packages/svelte-table/tests/fixtures/ExpandingHarness.svelte b/packages/svelte-table/tests/fixtures/ExpandingHarness.svelte
new file mode 100644
index 0000000000..5e75d1eb3f
--- /dev/null
+++ b/packages/svelte-table/tests/fixtures/ExpandingHarness.svelte
@@ -0,0 +1,42 @@
+<script lang="ts">
+  import { createExpandedRowModel, stockFeatures } from '@tanstack/table-core'
+  import { createTable } from '../../src/createTable.svelte'
+  import { createTableState } from '../../src/createTableState.svelte'
+  import type { ColumnDef, ExpandedState } from '@tanstack/table-core'
+
+  type Data = { id: string }
+
+  const features = {
+    ...stockFeatures,
+    expandedRowModel: createExpandedRowModel(),
+  }
+  const columns: Array<ColumnDef<typeof features, Data>> = [
+    { id: 'id', accessorKey: 'id' },
+  ]
+  const data = [{ id: '1' }, { id: '2' }]
+  const [expanded, setExpanded] = createTableState<ExpandedState>({})
+  const table = createTable({
+    data,
+    columns,
+    features,
+    getRowId: (row) => row.id,
+    getRowCanExpand: () => true,
+    state: {
+      get expanded() {
+        return expanded()
+      },
+    },
+    onExpandedChange: setExpanded,
+  })
+</script>
+
+<output aria-label="Expanded row ids"
+  >{table
+    .getRowModel()
+    .rows.filter((row) => row.getIsExpanded())
+    .map((row) => row.id)
+    .join(',')}</output
+>
+<button onclick={() => table.getRow('1').toggleExpanded()}>
+  Expand first row
+</button>
diff --git a/packages/svelte-table/tests/fixtures/PaginationHarness.svelte b/packages/svelte-table/tests/fixtures/PaginationHarness.svelte
index d3103b9a69..7e27afe79a 100644
--- a/packages/svelte-table/tests/fixtures/PaginationHarness.svelte
+++ b/packages/svelte-table/tests/fixtures/PaginationHarness.svelte
@@ -43,3 +43,4 @@
     .join(',')}</output
 >
 <button onclick={() => table.setPageSize(3)}>Show three rows</button>
+<button onclick={() => table.nextPage()}>Next page</button>