diff --git a/Assets/Info.plist b/Assets/Info.plist
index 4dd70f8..fd37aa9 100644
--- a/Assets/Info.plist
+++ b/Assets/Info.plist
@@ -22,9 +22,9 @@
 	<key>CFBundlePackageType</key>
 	<string>APPL</string>
 	<key>CFBundleShortVersionString</key>
-	<string>1.3.0</string>
+	<string>1.3.1</string>
 	<key>CFBundleVersion</key>
-	<string>18</string>
+	<string>19</string>
 	<key>LSMinimumSystemVersion</key>
 	<string>14.0</string>
 	<key>LSUIElement</key>
diff --git a/CHANGELOG.md b/CHANGELOG.md
index 240ee2b..440ebe5 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -4,6 +4,13 @@ All notable changes to this project are documented here.
 
 ## [Unreleased]
 
+## [1.3.1] - 2026-09-25
+
+### Fixed
+
+- On a Mac where Encaje is already set up, launching it no longer flashes the setup window and the welcome for a few seconds.
+- The setup window's spacing is balanced: less empty space above the icon and more room under "Set up later".
+
 ## [1.3.0] - 2026-09-25
 
 ### Changed
diff --git a/Sources/EncajeApp/EncajeApp.swift b/Sources/EncajeApp/EncajeApp.swift
index e14de9b..59abe3b 100644
--- a/Sources/EncajeApp/EncajeApp.swift
+++ b/Sources/EncajeApp/EncajeApp.swift
@@ -76,6 +76,7 @@ final class AppDelegate: NSObject, NSApplicationDelegate, NSWindowDelegate, NSMe
     NSWorkspace.shared.notificationCenter.addObserver(
       self, selector: #selector(workspaceActivated),
       name: NSWorkspace.didActivateApplicationNotification, object: nil)
+    model.refresh()
     permissionFlow.presentIfNeeded()
     if ProcessInfo.processInfo.environment["ENCAJE_SHOW_SETTINGS"] == "1" { showSettings() }
     if ProcessInfo.processInfo.environment["ENCAJE_SHOW_POPOVER"] == "1" { toggleMenuPopover() }
diff --git a/Sources/EncajeApp/PermissionFlow/PermissionFlowWindow.swift b/Sources/EncajeApp/PermissionFlow/PermissionFlowWindow.swift
index 8275f7b..e11108f 100644
--- a/Sources/EncajeApp/PermissionFlow/PermissionFlowWindow.swift
+++ b/Sources/EncajeApp/PermissionFlow/PermissionFlowWindow.swift
@@ -184,8 +184,7 @@ public struct PermissionFlowScreen: View {
       if welcome {
         PermissionFlowWelcomeView(model: model, onDone: finish)
           .padding(.horizontal, 32)
-          .padding(.top, 34)
-          .padding(.bottom, 26)
+          .padding(.bottom, 30)
           .transition(
             .asymmetric(insertion: .opacity.combined(with: .scale(scale: 0.96)), removal: .opacity))
       } else {
@@ -195,6 +194,7 @@ public struct PermissionFlowScreen: View {
     }
     .frame(width: PermissionFlowWindowController.width)
     .frame(height: height)
+    .ignoresSafeArea(.container, edges: .top)
     .onAppear {
       if height != nil && model.ready { welcome = true }
       appeared = true
@@ -249,7 +249,7 @@ public struct PermissionFlowScreen: View {
         .multilineTextAlignment(.center)
         .fixedSize(horizontal: false, vertical: true)
       }
-      .padding(.top, 30)
+      .padding(.top, 28)
       PermissionFlowChecklist(model: model, sourceFrame: sourceFrame)
         .padding(.top, 22)
       if let note = model.configuration.note {
@@ -269,7 +269,7 @@ public struct PermissionFlowScreen: View {
         .contentShape(Rectangle())
     }
     .padding(.horizontal, 28)
-    .padding(.bottom, 18)
+    .padding(.bottom, 24)
   }
 }